Based on RSCU and QRSCU Research Codon Bias of F/10 and G/11 Xylanase

Abstract:

According to the work of Shi Xiufan et al.(2000 Chinese Science Bulletin 45 2520) and Zhu Ping et al.(Chinese physics B,1(2009)),this study computes the relative usage degree of the synonymous codon of F/10 and G/11 Xylanase:(RSCU and QRSCU).Through the analysis and comparison,it was found that the quasi-amino acid shown more consistent preference to the synonymous codon.This result indicated that F/10 and G/11 Xylanase prefer to use the codons with strong combination of the codon-anticodon,just the codons ending with g/c based on the classification of quasi-amino acids.The results present here demonstrated a good accordance with the results that achieved on the 78 human genes and further verified codon preference closely related to quasi-amino acids coding method.